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SUT169 [ Saccharomyces cerevisiae S288C ]

Gene ID: 65052916, updated on 11-Sep-2024

Summary

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Official Symbol
SUT169
Primary source
SGD:S000303809
Locus tag
YNCH0011W
See related
AllianceGenome:SGD:S000303809
Gene type
ncRNA
RNA name
antisense_RNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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Genomic context

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See SUT169 in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
1
Sequence:
Chromosome: VIII; NC_001140.6 (378254..379237)

Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene aromatic-amino-acid:2-oxoglutarate transaminase Neighboring gene uncharacterized protein Neighboring gene Sps100p Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001140.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein Abundance Control by Non-coding Antisense Transcription. Huber F, et al. Cell Rep, 2016 Jun 21. PMID 27292640, Free PMC Article
  2. Upregulation of SPS100 gene expression by an antisense RNA via a switch of mRNA isoforms with different stabilities. Bunina D, et al. Nucleic Acids Res, 2017 Nov 2. PMID 28977638, Free PMC Article
  3. Bidirectional promoters generate pervasive transcription in yeast. Xu Z, et al. Nature, 2009 Feb 19. PMID 19169243, Free PMC Article
  4. Decapping of long noncoding RNAs regulates inducible genes. Geisler S, et al. Mol Cell, 2012 Feb 10. PMID 22226051, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • Antisense transcript; upregulates sporulation-specific gene SPS100 upon entry into starvation or sporulation; functions by changing relative expression of SPS100 mRNA isoforms from short, unstable transcript to long, stable species, suggesting novel mechanism of antisense-dependent gene regulation via mRNA isoform switching

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001140.6 Reference assembly

    Range
    378254..379237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_172476.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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