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LOC6504094 vesicle-fusing ATPase 1 [ Drosophila ananassae ]

Gene ID: 6504094, updated on 10-May-2024

Summary

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Gene symbol
LOC6504094
Gene description
vesicle-fusing ATPase 1
Locus tag
Dana_GF21411
See related
EnsemblRapid:LOC6504094
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF21411; GF21411-PA; GF21411-PB
Orthologs
fruit fly all
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Genomic context

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See LOC6504094 in Genome Data Viewer
Location:
chromosome: XL
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) XL NC_057931.1 (4151939..4156330)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473283.1 (148702..153094)

Chromosome XL - NC_057931.1Genomic Context describing neighboring genes Neighboring gene multiple edematous wings Neighboring gene SET domain containing 3 Neighboring gene clumping factor A Neighboring gene kinesin-like protein KIF23 Neighboring gene serine-rich adhesin for platelets Neighboring gene uncharacterized LOC123257494

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SNARE complex disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-fusing ATPase 1
Names
Dana\GF21411
Dana\GF21411-PA
Dana\GF21411-PB
dana_GLEANR_4611

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057931.1 Reference ASM1763931v2

    Range
    4151939..4156330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001964126.4 → XP_001964162.1  vesicle-fusing ATPase 1

    See identical proteins and their annotated locations for XP_001964162.1

    UniProtKB/TrEMBL
    B3MS56
    Related
    XP_001964162.1, XM_001964126.4
    Conserved Domains (4) summary
    smart01072
    Location:111 → 158
    CDC48_2; Cell division protein 48 (CDC48) domain 2
    COG0464
    Location:242 → 723
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:256 → 397
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam02359
    Location:4 → 85
    CDC48_N; Cell division protein 48 (CDC48), N-terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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