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LOC6497674 cleft lip and palate transmembrane protein 1 homolog [ Drosophila ananassae ]

Gene ID: 6497674, updated on 10-May-2024

Summary

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Gene symbol
LOC6497674
Gene description
cleft lip and palate transmembrane protein 1 homolog
Locus tag
Dana_GF14857
See related
EnsemblRapid:LOC6497674
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF14857; GF14857-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6497674 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 3R NC_057930.1 (26684354..26686856)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473268.1 (8287266..8289768)

Chromosome 3R - NC_057930.1Genomic Context describing neighboring genes Neighboring gene jumonji domain containing 4 Neighboring gene ribosomal protein L40 Neighboring gene protein atonal homolog 8 Neighboring gene galectin-9B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cleft lip and palate transmembrane protein 1 homolog
Names
Dana\GF14857
Dana\GF14857-PA
dana_GLEANR_15620

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057930.1 Reference ASM1763931v2

    Range
    26684354..26686856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001961561.2 → XP_001961597.1  cleft lip and palate transmembrane protein 1 homolog

    See identical proteins and their annotated locations for XP_001961597.1

    UniProtKB/TrEMBL
    B3MLU7
    Related
    XP_001961597.1, XM_001961561.2
    Conserved Domains (1) summary
    pfam05602
    Location:55 → 499
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials