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CHS2_2 chitin synthase, class 2 [ Aspergillus luchuensis ]

Gene ID: 64960397, updated on 31-Oct-2024

Summary

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Gene symbol
CHS2_2
Gene description
chitin synthase, class 2
Locus tag
AKAW2_40758S
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus luchuensis (strain: IFO 4308)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
Orthologs
Aspergillus fumigatus all
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Genomic context

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See CHS2_2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_054852.1 (2202837..2206565)

Chromosome 4 - NC_054852.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054852.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase, class 2
XP_041542838.1
  • CAZy:GT2_Chitin_synth;
    COG:M;
    EggNog:ENOG410PF8Q;
    InterPro:IPR029044,IPR004835,IPR004834,IPR013616;
    PFAM:PF01644,PF08407;
    TransMembrane:7 (o664-683i703-723o743-761i773-796o816-839i944-964o976-1005i);
    go_function: GO:0004100 - chitin synthase activity [Evidence IEA];
    go_function: GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA];
    go_process: GO:0006031 - chitin biosynthetic process [Evidence IEA]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_054852.1 Reference assembly

    Range
    2202837..2206565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041689122.1 → XP_041542838.1  chitin synthase, class 2 [Aspergillus luchuensis]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1M3TBV8, A0A7R7W9X0
    Conserved Domains (6) summary
    COG1215
    Location:465 → 797
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam03276
    Location:18 → 146
    Gag_spuma; Spumavirus gag protein
    pfam01644
    Location:355 → 517
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:284 → 354
    Chitin_synth_1N; Chitin synthase N-terminal
    pfam16625
    Location:123 → 168
    ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
    cl14855
    Location:957 → 1015
    Caps_synth_CapC; Capsule biosynthesis CapC
Nucleotide Protein
Heading Accession and Version

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