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snama something that sticks like glue [ Drosophila ananassae ]

Gene ID: 6494235, updated on 15-May-2024

Summary

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Gene symbol
snama
Gene description
something that sticks like glue
Locus tag
Dana_GF11371
See related
EnsemblRapid:LOC6494235
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF11371; GF11371-PA; GF11371-PB; GF11371-PC; GF11371-PD
Orthologs
fruit fly all
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Genomic context

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See snama in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 3L NC_057929.1 (14600947..14606715, complement)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473265.1 (3263122..3268805)

Chromosome 3L - NC_057929.1Genomic Context describing neighboring genes Neighboring gene helicase ARIP4 Neighboring gene histone acetyltransferase KAT6B Neighboring gene serine/threonine-protein kinase gek Neighboring gene uncharacterized LOC6494234 Neighboring gene MICOS complex subunit Mic10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RBBP6
Names
Dana\GF11371
Dana\GF11371-PA
Dana\GF11371-PB
Dana\GF11371-PC
Dana\GF11371-PD
dana_GLEANR_11434

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057929.1 Reference ASM1763931v2

    Range
    14600947..14606715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044715878.1 → XP_044571813.1  E3 ubiquitin-protein ligase RBBP6

    UniProtKB/TrEMBL
    B3MDW6
    Related
    XP_044571813.1, XM_044715878.1
    Conserved Domains (4) summary
    PHA03247
    Location:631 → 916
    PHA03247; large tegument protein UL36; Provisional
    COG5222
    Location:3 → 279
    COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    PRK12678
    Location:1015 → 1152
    PRK12678; transcription termination factor Rho; Provisional
    TIGR01642
    Location:566 → 702
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
Nucleotide Protein Strain
Heading Accession and Version

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