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EEF1B2P6 eukaryotic translation elongation factor 1 beta 2 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 647030, updated on 17-Sep-2024

Summary

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Official Symbol
EEF1B2P6provided by HGNC
Official Full Name
eukaryotic translation elongation factor 1 beta 2 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:51453
See related
Ensembl:ENSG00000213261 AllianceGenome:HGNC:51453
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See EEF1B2P6 in Genome Data Viewer
Location:
7q32.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (131661900..131662665, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (132979803..132980567, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (131346659..131347424, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene muskelin 1 Neighboring gene uncharacterized LOC124901747 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:131070963-131071136 Neighboring gene MPRA-validated peak6726 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr7:131123760-131124261 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131190418-131191332 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18662 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131198033-131198892 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:131202395-131202894 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26677 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:131214845-131215344 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131220834-131221758 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131229138-131229981 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:131235953-131236460 Neighboring gene ribosomal protein L31 pseudogene 36 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:131236969-131237476 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18663 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131241775-131242322 Neighboring gene podocalyxin like Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18664 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131266468-131267072 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:131269032-131269532 Neighboring gene MPRA-validated peak6728 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:131277274-131277774 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131289409-131290262 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131290263-131291118 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131291119-131291972 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131305309-131305854 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131308691-131309358 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131309359-131310024 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131323052-131323648 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:131333987-131334690 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131337191-131337758 Neighboring gene Sharpr-MPRA regulatory regions 8940 and 15248 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:131340839-131341390 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18666 Neighboring gene ribosomal protein S14 pseudogene 10 Neighboring gene ribosomal protein S15a pseudogene 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Wellcome Trust Case Control Consortium. Nature, 2007 Jun 7. PMID 17554300, Free PMC Article
  2. Human chromosome 7: DNA sequence and biology. Scherer SW, et al. Science, 2003 May 2. PMID 12690205, Free PMC Article
  3. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
  4. SERBP1 Promotes Stress Granule Clearance by Regulating 26S Proteasome Activity and G3BP1 Ubiquitination and Protects Male Germ Cells from Thermostimuli Damage. Wang F, et al. Research (Wash D C), 2023. PMID 37223481, Free PMC Article
  5. The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers. Oravcová M, et al. Elife, 2022 Nov 14. PMID 36373674, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022904.3 

    Range
    101..866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    131661900..131662665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    132979803..132980567 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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