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SLC35G4 solute carrier family 35 member G4 [ Homo sapiens (human) ]

Gene ID: 646000, updated on 11-Apr-2024

Summary

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Official Symbol
SLC35G4provided by HGNC
Official Full Name
solute carrier family 35 member G4provided by HGNC
Primary source
HGNC:HGNC:31043
See related
Ensembl:ENSG00000236396 AllianceGenome:HGNC:31043
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AMAC1L1; SLC35G4P
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See SLC35G4 in Genome Data Viewer
Location:
18p11.21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (11609596..11610612)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (11771916..11772932)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (11609595..11610611)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985173 Neighboring gene long intergenic non-protein coding RNA 1928 Neighboring gene long intergenic non-protein coding RNA 1255 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:11519045-11519545 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9299 Neighboring gene nuclear pore complex interacting protein family member B1, pseudogene Neighboring gene microRNA 7153

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Emergence of primate genes by retrotransposon-mediated sequence transduction. Xing J, et al. Proc Natl Acad Sci U S A, 2006 Nov 21. PMID 17101974, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative solute carrier family 35 member G4
Names
acyl-malonyl-condensing enzyme 1-like protein 1
protein AMAC1L1
putative solute carrier family 35 member G4 pseudogene
solute carrier family 35, member G4, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001282300.2 → NP_001269229.1  putative solute carrier family 35 member G4

    See identical proteins and their annotated locations for NP_001269229.1

    Status: VALIDATED

    Source sequence(s)
    AP001120
    Consensus CDS
    CCDS82241.1
    UniProtKB/Swiss-Prot
    P0C7Q5
    Related
    ENSP00000490812.1, ENST00000588001.2
    Conserved Domains (2) summary
    COG0697
    Location:52 → 326
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
    cl23754
    Location:221 → 324
    EamA; EamA-like transporter family

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    11609596..11610612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    11771916..11772932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C7Q5.1 GenPept UniProtKB/Swiss-Prot:P0C7Q5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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