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RPS11P2 ribosomal protein S11 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 645916, updated on 17-Sep-2024

Summary

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Official Symbol
RPS11P2provided by HGNC
Official Full Name
ribosomal protein S11 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:37007
See related
Ensembl:ENSG00000228844 AllianceGenome:HGNC:37007
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS11_1_184
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Genomic context

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See RPS11P2 in Genome Data Viewer
Location:
1q43
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (240636534..240637073, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (240047891..240048430, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (240799834..240800373, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene formin 2 Neighboring gene ADH5 pseudogene 3 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:240421073-240422272 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:240656515-240656686 Neighboring gene MPRA-validated peak794 silencer Neighboring gene gremlin 2, DAN family BMP antagonist Neighboring gene uncharacterized LOC124904600 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:240770159-240770658 Neighboring gene ferredoxin 2 pseudogene Neighboring gene RNA, U5F small nuclear 8, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010147.3 

    Range
    101..640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    240636534..240637073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    240047891..240048430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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