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HMGB1P6 high mobility group box 1 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 645292, updated on 17-Sep-2024

Summary

Official Symbol
HMGB1P6provided by HGNC
Official Full Name
high mobility group box 1 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:4998
See related
AllianceGenome:HGNC:4998
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HMG1L6; HMGB1L6
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Genomic context

See HMGB1P6 in Genome Data Viewer
Location:
15q23
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (71163472..71165512, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (68986753..68988793, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (71455811..71457851, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370886 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr15:71377897-71378512 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9702 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9703 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9704 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6613 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6610 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:71407710-71407887 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:71412420-71412936 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:71446356-71447555 Neighboring gene thrombospondin type 1 domain containing 4 Neighboring gene cancer/testis associated 62 Neighboring gene Sharpr-MPRA regulatory region 1499 Neighboring gene THSD4 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:71491544-71492044 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:71492045-71492545 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr15:71494990-71495834 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr15:71495835-71496677 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:71515768-71516268 Neighboring gene uncharacterized LOC105370884

Genomic regions, transcripts, and products

General gene information

Other Names

  • high-mobility group (nonhistone chromosomal) protein 1-like 6 pseudogene
  • high-mobility group box 1-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006664.2 

    Range
    101..2141
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    71163472..71165512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    68986753..68988793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)