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LOC645272 adenosylmethionine decarboxylase 1 pseudogene [ Homo sapiens (human) ]

Gene ID: 645272, updated on 17-Sep-2024

Summary

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Gene symbol
LOC645272
Gene description
adenosylmethionine decarboxylase 1 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC645272 in Genome Data Viewer
Location:
7q36.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (157088108..157088377, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (158275886..158276155, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (156880802..156881071, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18857 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18858 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18859 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26918 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26919 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26920 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26921 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26922 Neighboring gene MNX1 antisense RNA 2 Neighboring gene MNX1 antisense RNA 1 (head to head) Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:156833123-156833822 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:156838101-156838601 Neighboring gene MPRA-validated peak6868 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:156847242-156847742 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:156847743-156848243 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:156870553-156871110 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:156871111-156871667 Neighboring gene uncharacterized LOC105375607 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:156917852-156918402 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18860 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18861 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18862 Neighboring gene ubiquitin protein ligase E3C Neighboring gene RPS27A pseudogene 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Human chromosome 7: DNA sequence and biology. Scherer SW, et al. Science, 2003 May 2. PMID 12690205, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005742.3 

    Range
    101..370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    157088108..157088377 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    158275886..158276155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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