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DBF4P1 DBF4 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 645084, updated on 17-Sep-2024

Summary

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Official Symbol
DBF4P1provided by HGNC
Official Full Name
DBF4 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:45059
See related
AllianceGenome:HGNC:45059
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See DBF4P1 in Genome Data Viewer
Location:
10q21.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (64168753..64169890, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (65026622..65027759, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (65928514..65929651, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902439 Neighboring gene nuclear pore associated protein 1 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2412 Neighboring gene uncharacterized LOC105378333 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3445 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3446 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3447 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3448 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:65801475-65801975 Neighboring gene Sharpr-MPRA regulatory region 2403 Neighboring gene Sharpr-MPRA regulatory region 9742 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:65880319-65880911 Neighboring gene Sharpr-MPRA regulatory region 9231 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:66144462-66145292 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:66145293-66146122 Neighboring gene MPRA-validated peak969 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr10:66266441-66266965 Neighboring gene uncharacterized LOC105378335 Neighboring gene MPRA-validated peak971 silencer Neighboring gene MPRA-validated peak972 silencer Neighboring gene ribosomal protein L17 pseudogene 35 Neighboring gene uncharacterized LOC107984239 Neighboring gene Sharpr-MPRA regulatory region 14987 Neighboring gene cytochrome P450 family 2 subfamily C member 61, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • DBF4 homolog pseudogene 1
  • DBF4 zinc finger pseudogene 1
  • hCG2024596

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006968.2 

    Range
    1..1138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    64168753..64169890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    65026622..65027759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials