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BMS1P15 BMS1 pseudogene 15 [ Homo sapiens (human) ]

Gene ID: 642311, updated on 17-Sep-2024

Summary

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Official Symbol
BMS1P15provided by HGNC
Official Full Name
BMS1 pseudogene 15provided by HGNC
Primary source
HGNC:HGNC:49160
See related
Ensembl:ENSG00000258780 AllianceGenome:HGNC:49160
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See BMS1P15 in Genome Data Viewer
Location:
15q11.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (20153776..20160826)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (18062139..18069191)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (20359029..20366079)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:20306489-20307277 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:20307349-20307870 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:20307871-20308390 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:20308391-20308911 Neighboring gene RNA, 7SL, cytoplasmic 584, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:20310473-20310993 Neighboring gene uncharacterized LOC105379203 Neighboring gene rhophilin Rho GTPase binding protein 2 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:20449675-20450176 Neighboring gene CHEK2 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Human paralogs of KIAA0187 were created through independent pericentromeric-directed and chromosome-specific duplication mechanisms. Crosier M, et al. Genome Res, 2002 Jan. PMID 11779832, Free PMC Article
  2. Analysis of the DNA sequence and duplication history of human chromosome 15. Zody MC, et al. Nature, 2006 Mar 30. PMID 16572171
  3. DNA sequence and analysis of human chromosome 9. Humphray SJ, et al. Nature, 2004 May 27. PMID 15164053, Free PMC Article
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • BMS1 homolog, ribosome assembly protein pseudogene
  • BMS1, ribosome biogenesis factor pseudogene 15
  • Putative BMS1-like protein ENSP00000382360
  • Putative BMS1-like protein ENSP00000383048
  • Putative BMS1-like protein ENSP00000383088

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011423.1 

    Range
    101..7151
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    20153776..20160826
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    379601..386651
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    18062139..18069191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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