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Vmn2r3 vomeronasal 2, receptor 3 [ Mus musculus (house mouse) ]

Gene ID: 637004, updated on 17-Aug-2024

Summary

Official Symbol
Vmn2r3provided by MGI
Official Full Name
vomeronasal 2, receptor 3provided by MGI
Primary source
MGI:MGI:3643995
See related
Ensembl:ENSMUSG00000091572 AllianceGenome:MGI:3643995
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG637004
Summary
Predicted to enable G protein-coupled receptor activity and olfactory receptor activity. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Vmn2r3 in Genome Data Viewer
Location:
3 E1; 3 30.15 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (64166225..64197130, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (64258961..64287426, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 2, receptor 1 Neighboring gene vomeronasal 2, receptor 2 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_07842 Neighboring gene STARR-seq mESC enhancer starr_07843 Neighboring gene vomeronasal 2, receptor 7 pseudogene Neighboring gene STARR-seq mESC enhancer starr_07845 Neighboring gene STARR-seq mESC enhancer starr_07847 Neighboring gene predicted gene, 23897 Neighboring gene vomeronasal 2, receptor, pseudogene 4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
vomeronasal 2, receptor 3
Names
tissue-type vomeronasal neurons putative pheromone receptor V2
vomeronasal receptor Vmn2r3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001384949.1NP_001371878.1  vomeronasal 2, receptor 3 precursor

    Status: VALIDATED

    Source sequence(s)
    AC116599, AC119863
    Consensus CDS
    CCDS50920.1
    UniProtKB/TrEMBL
    E9Q107, H3BJ88
    Related
    ENSMUSP00000134891.3, ENSMUST00000176328.9
    Conserved Domains (3) summary
    cd15280
    Location:616868
    7tmC_V2R-like; vomeronasal type-2 receptor-like proteins, member of the class C family of seven-transmembrane G protein-coupled receptors
    pfam07562
    Location:543596
    NCD3G; Nine Cysteines Domain of family 3 GPCR
    cl10011
    Location:53535
    Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    64166225..64197130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001104614.1: Suppressed sequence

    Description
    NM_001104614.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.