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Gm7168 predicted gene 7168 [ Mus musculus (house mouse) ]

Gene ID: 635895, updated on 28-Oct-2024

Summary

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Official Symbol
Gm7168provided by MGI
Official Full Name
predicted gene 7168provided by MGI
Primary source
MGI:MGI:3643198
See related
Ensembl:ENSMUSG00000067941 AllianceGenome:MGI:3643198
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG635895
Summary
Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in chromatin remodeling and protein phosphorylation. [provided by Alliance of Genome Resources, Oct 2024]
Expression
Restricted expression toward testis adult (RPKM 8.3) See more
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Genomic context

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See Gm7168 in Genome Data Viewer
Location:
17 A2; 17 8.95 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (14167097..14178052)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (13946835..13957790)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_41878 Neighboring gene predicted gene, 24867 Neighboring gene t-complex-associated testis expressed 2 Neighboring gene afadin, adherens junction formation factor Neighboring gene STARR-seq mESC enhancer starr_41882 Neighboring gene STARR-seq mESC enhancer starr_41883 Neighboring gene STARR-seq mESC enhancer starr_41885 Neighboring gene predicted gene, 33889 Neighboring gene predicted gene 7356

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC130373, MGC141510

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables histone H2AS1 kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
  
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
sperm motility kinase Y
NP_001116449.1
XP_006524826.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001122977.1 → NP_001116449.1  sperm motility kinase Y

    See identical proteins and their annotated locations for NP_001116449.1

    Status: PROVISIONAL

    Source sequence(s)
    BC107382
    Consensus CDS
    CCDS49956.1
    UniProtKB/Swiss-Prot
    A0AUV4, Q3B7Y1
    UniProtKB/TrEMBL
    A0A0R4J163
    Related
    ENSMUSP00000094997.4, ENSMUST00000088809.6
    Conserved Domains (3) summary
    smart00220
    Location:28 → 276
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14337
    Location:295 → 334
    UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
    cd14003
    Location:27 → 275
    STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    14167097..14178052
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006524763.2 → XP_006524826.1  sperm motility kinase Y isoform X1

    See identical proteins and their annotated locations for XP_006524826.1

    UniProtKB/Swiss-Prot
    A0AUV4, Q3B7Y1
    Conserved Domains (2) summary
    cd14337
    Location:336 → 375
    UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
    cd14003
    Location:68 → 316
    STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases

RNA

  1. XR_001782097.1 RNA Sequence

  2. XR_001782099.1 RNA Sequence

  3. XR_001782102.1 RNA Sequence

  4. XR_001782098.1 RNA Sequence

  5. XR_001782100.1 RNA Sequence

  6. XR_001782101.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0AUV4.1 GenPept UniProtKB/Swiss-Prot:A0AUV4

Gene LinkOut

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