U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PtrM4_010190 SPS1, Serine-threonine protein kinase [ Pyrenophora tritici-repentis ]

Gene ID: 6340143, updated on 10-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
PtrM4_010190
Gene description
SPS1, Serine-threonine protein kinase
Locus tag
PtrM4_010190
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pyrenophora tritici-repentis (strain: M4, nat-host: Triticum aestivum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora
Old locus tag
PTRG_00678
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PtrM4_010190 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_089390.1 (2527262..2529351)

Chromosome 1 - NC_089390.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene RPC10, DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_089390.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity. Moolhuijzen P, et al. BMC Genomics, 2018 Apr 23. PMID 29685100, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
SPS1, Serine-threonine protein kinase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089390.1 Reference assembly

    Range
    2527262..2529351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001930976.1 → XP_001931011.1  SPS1, Serine-threonine protein kinase [Pyrenophora tritici-repentis]

    See identical proteins and their annotated locations for XP_001931011.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2W1DH13, B2VSH4
    Conserved Domains (1) summary
    cl21453
    Location:248 → 625
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials