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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_013359.1 RefSeqGene
- Range
-
4783..14762
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_420
mRNA and Protein(s)
-
NM_001037.5 → NP_001028.1 sodium channel subunit beta-1 isoform a precursor
See identical proteins and their annotated locations for NP_001028.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (a) represents the longer transcript but encodes the shorter isoform (a).
- Source sequence(s)
-
AC020907, BC067122
- Consensus CDS
-
CCDS12441.1
- UniProtKB/Swiss-Prot
- Q07699, Q5TZZ4, Q6TN97
- UniProtKB/TrEMBL
-
Q8WU42
- Related
- ENSP00000262631.3, ENST00000262631.11
- Conserved Domains (2) summary
-
- pfam07686
Location:23 → 147
- V-set; Immunoglobulin V-set domain
- cd00096
Location:26 → 32
- Ig; Ig strand A' [structural motif]
-
NM_001321605.2 → NP_001308534.1 sodium channel subunit beta-1 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (c) encodes an isoform (c) that lacks a predicted signal peptide compared to isoforms a and b.
- Source sequence(s)
-
AC020907, BC067122, DA062026
- Consensus CDS
-
CCDS86744.1
- UniProtKB/TrEMBL
- A0A1W2PR05, Q8WU42
- Related
- ENSP00000492247.1, ENST00000596348.2
- Conserved Domains (2) summary
-
- pfam07686
Location:8 → 114
- V-set; Immunoglobulin V-set domain
- cd00096
Location:35 → 41
- Ig; Ig strand C' [structural motif]
-
NM_199037.5 → NP_950238.1 sodium channel subunit beta-1 isoform b precursor
See identical proteins and their annotated locations for NP_950238.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (b) differs in the 3' UTR and coding region compared to variant a. The resulting isoform (b) is longer and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AC020907, AY391842, BC067122
- Consensus CDS
-
CCDS46047.1
- UniProtKB/TrEMBL
-
A0A1W2PS68
- Related
- ENSP00000396915.2, ENST00000415950.5
- Conserved Domains (1) summary
-
- pfam07686
Location:23 → 123
- V-set; Immunoglobulin V-set domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
35030470..35040449
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
37575088..37585067
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)