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Gm15801 predicted gene 15801 [ Mus musculus (house mouse) ]

Gene ID: 627166, updated on 17-Aug-2024

Summary

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Official Symbol
Gm15801provided by MGI
Official Full Name
predicted gene 15801provided by MGI
Primary source
MGI:MGI:3779625
See related
AllianceGenome:MGI:3779625
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Gm15801 in Genome Data Viewer
Location:
19 C3; 19 34.25 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (40547363..40550199, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (40558919..40561755, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A930028N01 gene Neighboring gene predicted gene 5693 Neighboring gene sorbin and SH3 domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_46134 Neighboring gene STARR-positive B cell enhancer mm9_chr19:40582986-40583287 Neighboring gene STARR-positive B cell enhancer ABC_E8749 Neighboring gene aldehyde dehydrogenase 18 family, member A1 Neighboring gene STARR-positive B cell enhancer ABC_E11675 Neighboring gene STARR-positive B cell enhancer ABC_E7650 Neighboring gene STARR-positive B cell enhancer ABC_E1977 Neighboring gene predicted gene, 27042 Neighboring gene tectonic family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. Piao Y, et al. Genome Res, 2001 Sep. PMID 11544199, Free PMC Article
  2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • protein tyrosine phosphatase 4a1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016184.1 

    Range
    101..2937
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    40547363..40550199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_002686.1: Suppressed sequence

    Description
    NR_002686.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is not transcribed.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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