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PAP_RS10355 cupin domain-containing protein [ Palaeococcus pacificus DY20341 ]

Gene ID: 62368413, updated on 22-Oct-2024

Summary

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Gene symbol
PAP_RS10355
Gene description
cupin domain-containing protein
Locus tag
PAP_RS10355
Gene type
protein coding
Organism
Palaeococcus pacificus DY20341 (strain: DY20341, culture-collection: DSM:24777, culture-collection: JCM:17873, type-material: type strain of Palaeococcus pacificus)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus
Old locus tag
PAP_00215
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Genomic context

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NZ_CP006019.1Genomic Context describing neighboring genes Neighboring gene isoprenylcysteine carboxylmethyltransferase family protein Neighboring gene class I SAM-dependent methyltransferase Neighboring gene glycine cleavage system protein GcvH Neighboring gene DMT family transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP006019.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete Genome Sequence of Hyperthermophilic Piezophilic Archaeon Palaeococcus pacificus DY20341T, Isolated from Deep-Sea Hydrothermal Sediments. Zeng X, et al. Genome Announc, 2015 Sep 17. PMID 26383653, Free PMC Article
  2. Cupins: a new superfamily of functionally diverse proteins that include germins and plant storage proteins. Dunwell JM. Biotechnol Genet Eng Rev, 1998. PMID 9573603

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cupin domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP006019.1 Reference assembly

    Range
    39776..40459
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_201769538.1 cupin domain-containing protein [Palaeococcus pacificus]

    UniProtKB/TrEMBL
    A0A075LP65
    Conserved Domains (2) summary
    cd02238
    Location:124 → 226
    cupin_KdgF; pectin degradation protein KdgF and related proteins, cupin domain
    cl40423
    Location:28 → 92
    cupin_RmlC-like; RmlC-like cupin superfamily
Nucleotide Protein
Heading Accession and Version