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Gm8108 predicted gene 8108 [ Mus musculus (house mouse) ]

Gene ID: 623078, updated on 17-Aug-2024

Summary

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Official Symbol
Gm8108provided by MGI
Official Full Name
predicted gene 8108provided by MGI
Primary source
MGI:MGI:3779783
See related
AllianceGenome:MGI:3779783
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
666442
Expression
Biased expression in CNS E18 (RPKM 4.8), CNS E14 (RPKM 2.6) and 12 other tissues See more
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Genomic context

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See Gm8108 in Genome Data Viewer
Location:
14 A2; 14 2.24 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (18338052..18359297, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (4110352..4131721)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene 3127 Neighboring gene predicted gene, 32966 Neighboring gene predicted gene, 53828 Neighboring gene STARR-seq mESC enhancer starr_35811 Neighboring gene predicted gene 3115 Neighboring gene STARR-seq mESC enhancer starr_35810 Neighboring gene predicted gene 5796

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein Gm8108

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    18338052..18359297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158967.1 → XP_036014860.1  uncharacterized protein Gm8108

    UniProtKB/TrEMBL
    A0AA74KSW7
    Conserved Domains (1) summary
    pfam04822
    Location:101 → 178
    Takusan

RNA

  1. XR_004938477.1 RNA Sequence

  2. XR_004938479.1 RNA Sequence

  3. XR_004938478.1 RNA Sequence

  4. XR_004938476.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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