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Gemin6-ps gem nuclear organelle associated protein 6, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 621705, updated on 2-Nov-2024

Summary

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Official Symbol
Gemin6-psprovided by MGI
Official Full Name
gem nuclear organelle associated protein 6, pseudogeneprovided by MGI
Primary source
MGI:MGI:3645567
See related
AllianceGenome:MGI:3645567
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm6253; EG621705
Summary
Predicted to be involved in spliceosomal snRNP assembly. Predicted to be located in Gemini of coiled bodies and cytosol. Predicted to be part of SMN complex. Orthologous to human GEMIN6 (gem nuclear organelle associated protein 6). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Gemin6-ps in Genome Data Viewer
Location:
6 F1; 6 55.55 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (117785610..117786522)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (117808672..117809316)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene 9946 Neighboring gene STARR-seq mESC enhancer starr_17117 Neighboring gene RIKEN cDNA 1700030F04 gene Neighboring gene STARR-seq mESC enhancer starr_17118 Neighboring gene STARR-seq mESC enhancer starr_17119 Neighboring gene STARR-seq mESC enhancer starr_17120 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:117791080-117791189 Neighboring gene zinc finger protein 637 Neighboring gene zinc finger protein 239

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in spliceosomal snRNP assembly ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in Gemini of coiled bodies ISO
Inferred from Sequence Orthology
more info
  
part_of SMN complex ISO
Inferred from Sequence Orthology
more info
  
part_of SMN-Sm protein complex ISO
Inferred from Sequence Orthology
more info
  
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in cytosol ISO
Inferred from Sequence Orthology
more info
  
located_in nuclear body ISO
Inferred from Sequence Orthology
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
gem-associated protein 6-like
Names
predicted pseudogene 6253

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    117785610..117786522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036152463.1 → XP_036008356.1  gem-associated protein 6-like

    Conserved Domains (1) summary
    pfam06372
    Location:1 → 166
    Gemin6; Gemin6 protein
Nucleotide Protein Strain
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