cebpb CCAAT enhancer binding protein beta [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: cebpbprovided by Xenbase
Official Full Name: CCAAT enhancer binding protein betaprovided by Xenbase
Primary source: Xenbase:XB-GENE-479779
See related: AllianceGenome:Xenbase:XB-GENE-479779
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: lap; crp2; tcf5; il6dbp; nf-il6; cebpb-a; cebpb-b; C/EBPbeta; c/ebp-beta; xC/EBPbeta
Summary: Predicted to enable DNA-binding transcription factor activity. Predicted to act upstream of or within DNA-templated transcription and regulation of DNA-templated transcription. Predicted to be located in nucleus. Orthologous to human CEBPB (CCAAT enhancer binding protein beta). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	10	NC_030686.2 (36063560..36068331, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	10	NC_030686.1 (27830000..27834768, complement)

Chromosome 10 - NC_030686.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA-templated transcription	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: CCAAT/enhancer-binding protein beta

Names: CCAAT/enhancer binding protein (C/EBP), beta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001035121.1 → NP_001030293.1 CCAAT/enhancer-binding protein beta

See identical proteins and their annotated locations for NP_001030293.1

Status: PROVISIONAL

Source sequence(s)

BC103716

UniProtKB/TrEMBL

Q3SYP1

Conserved Domains (1) summary

cd14712
Location:67 → 134

bZIP_CEBPB; Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein beta (CEBPB): a DNA-binding and dimerization domain