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PODANS_7_10880 hypothetical protein [ Podospora anserina S mat+ ]

Gene ID: 6192042, updated on 17-May-2024

Summary

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Gene symbol
PODANS_7_10880
Gene description
hypothetical protein
Locus tag
PODANS_7_10880
See related
FungiDB:PODANS_7_10880; VEuPathDB:PODANS_7_10880
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Podospora anserina S mat+ (strain: S mat+)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora
Old locus tag
PODANSg5491
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Genomic context

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See PODANS_7_10880 in Genome Data Viewer
Location:
chromosome: 7, map: unlocalized
Exon count:
2

NW_001914854.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001914854.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of the model ascomycete fungus Podospora anserina. Espagne E, et al. Genome Biol, 2008. PMID 18460219, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ornithine aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in arginine catabolic process to proline via ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001914854.1 Reference assembly

    Range
    3164476..3165943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001908421.1 → XP_001908456.1  uncharacterized protein PODANS_7_10880 [Podospora anserina S mat+]

    See identical proteins and their annotated locations for XP_001908456.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B2AXK5
    Conserved Domains (2) summary
    COG0160
    Location:57 → 456
    GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
    TIGR01885
    Location:55 → 454
    Orn_aminotrans; ornithine aminotransferase
Nucleotide Protein
Heading Accession and Version

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