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CLDN9 claudin 9 [ Bos taurus (domestic cattle) ]

Gene ID: 617449, updated on 4-Oct-2024

Summary

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Official Symbol
CLDN9provided by VGNC
Official Full Name
claudin 9provided by VGNC
Primary source
VGNC:VGNC:27420
See related
BGD:BT23488; Ensembl:ENSBTAG00000058141
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CLDN9 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (2430977..2432883)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene progestin and adipoQ receptor family member 4 Neighboring gene protein kinase, membrane associated tyrosine/threonine 1 Neighboring gene glycine rich extracellular protein 1 Neighboring gene TNF receptor superfamily member 12A Neighboring gene claudin 6 Neighboring gene host cell factor C1 regulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    2430977..2432883
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002697935.6 → XP_002697981.1  claudin-9

    See identical proteins and their annotated locations for XP_002697981.1

    UniProtKB/TrEMBL
    A0AAA9TEZ5
    Related
    ENSBTAP00000095411.1, ENSBTAT00000106623.1
    Conserved Domains (1) summary
    cl21598
    Location:4 → 165
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials