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LRRC32 leucine rich repeat containing 32 [ Bos taurus (domestic cattle) ]

Gene ID: 615467, updated on 4-Oct-2024

Summary

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Official Symbol
LRRC32provided by VGNC
Official Full Name
leucine rich repeat containing 32provided by VGNC
Primary source
VGNC:VGNC:54884
See related
BGD:BT13859; Ensembl:ENSBTAG00000001301
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See LRRC32 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (56043484..56057456, complement)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene EMSY transcriptional repressor, BRCA2 interacting Neighboring gene prefoldin subunit 4-like Neighboring gene uncharacterized LOC112441534 Neighboring gene guanylate cyclase 2E

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming growth factor beta activator LRRC32

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193075.2 → NP_001180004.1  transforming growth factor beta activator LRRC32 precursor

    See identical proteins and their annotated locations for NP_001180004.1

    Status: VALIDATED

    Source sequence(s)
    NKLS02000015
    UniProtKB/TrEMBL
    E1BAW2
    Related
    ENSBTAP00000001716.3, ENSBTAT00000001716.5
    Conserved Domains (3) summary
    sd00033
    Location:53 → 75
    LRR_RI; leucine-rich repeat [structural motif]
    cl26161
    Location:18 → 277
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cl26793
    Location:79 → 549
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    56043484..56057456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010812754.4 → XP_010811056.1  transforming growth factor beta activator LRRC32 isoform X1

    See identical proteins and their annotated locations for XP_010811056.1

    UniProtKB/TrEMBL
    E1BAW2
    Conserved Domains (3) summary
    sd00033
    Location:53 → 75
    LRR_RI; leucine-rich repeat [structural motif]
    cl26161
    Location:18 → 277
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cl26793
    Location:79 → 549
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

  2. XM_010812752.4 → XP_010811054.1  transforming growth factor beta activator LRRC32 isoform X1

    See identical proteins and their annotated locations for XP_010811054.1

    UniProtKB/TrEMBL
    E1BAW2
    Conserved Domains (3) summary
    sd00033
    Location:53 → 75
    LRR_RI; leucine-rich repeat [structural motif]
    cl26161
    Location:18 → 277
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cl26793
    Location:79 → 549
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

  3. XM_024975537.2 → XP_024831305.1  transforming growth factor beta activator LRRC32 isoform X1

    UniProtKB/TrEMBL
    E1BAW2
    Conserved Domains (3) summary
    sd00033
    Location:53 → 75
    LRR_RI; leucine-rich repeat [structural motif]
    cl26161
    Location:18 → 277
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cl26793
    Location:79 → 549
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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