U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DX03_RS14540 alpha-amylase family glycosyl hydrolase [ Stenotrophomonas rhizophila ]

Gene ID: 61477181, updated on 13-May-2024

Summary

Go to the top of the page Help
Gene symbol
DX03_RS14540
Gene description
alpha-amylase family glycosyl hydrolase
Locus tag
DX03_RS14540
Gene type
protein coding
Organism
Stenotrophomonas rhizophila (strain: DSM 14405, nat-host: Brassica napus, type-material: type strain of Stenotrophomonas rhizophila)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas
Old locus tag
DX03_14795
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP007597.1Genomic Context describing neighboring genes Neighboring gene ATP-binding protein Neighboring gene ATPase domain-containing protein Neighboring gene SseB family protein Neighboring gene MFS transporter Neighboring gene Six-hairpin glycosidase-like protein Neighboring gene glycoside hydrolase family 97 protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP007597.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Crystal structure of yellow meal worm alpha-amylase at 1.64 A resolution. Strobl S, et al. J Mol Biol, 1998 May 8. PMID 9600843
  2. Refined molecular structure of pig pancreatic alpha-amylase at 2.1 A resolution. Larson SB, et al. J Mol Biol, 1994 Feb 4. PMID 8107092

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
alpha-amylase family glycosyl hydrolase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP007597.1 Reference assembly

    Range
    3372059..3373774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_038689859.1 alpha-amylase family glycosyl hydrolase [Stenotrophomonas rhizophila]

    See identical proteins and their annotated locations for WP_038689859.1

    Conserved Domains (2) summary
    cd11339
    Location:34 → 456
    AmyAc_bac_CMD_like_2; Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins
    pfam00128
    Location:84 → 415
    Alpha-amylase; Alpha amylase, catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Research Materials