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DX03_RS08675 TIGR02594 family protein [ Stenotrophomonas rhizophila ]

Gene ID: 61476036, updated on 13-May-2024

Summary

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Gene symbol
DX03_RS08675
Gene description
TIGR02594 family protein
Locus tag
DX03_RS08675
Gene type
protein coding
Organism
Stenotrophomonas rhizophila (strain: DSM 14405, nat-host: Brassica napus, type-material: type strain of Stenotrophomonas rhizophila)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas
Old locus tag
DX03_08860
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Genomic context

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NZ_CP007597.1Genomic Context describing neighboring genes Neighboring gene DUF1543 domain-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene type VI secretion system Vgr family protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP007597.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
TIGR02594 family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP007597.1 Reference assembly

    Range
    2007716..2009620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_038687979.1 TIGR02594 family protein [Stenotrophomonas rhizophila]

    See identical proteins and their annotated locations for WP_038687979.1

    Conserved Domains (4) summary
    cd00118
    Location:332 → 376
    LysM; Lysine Motif is a small domain involved in binding peptidoglycan
    PHA02564
    Location:38 → 142
    V; virion protein; Provisional
    COG1388
    Location:276 → 382
    LysM; LysM repeat [Cell wall/membrane/envelope biogenesis]
    cl21534
    Location:457 → 592
    NLPC_P60; NlpC/P60 family
Nucleotide Protein
Heading Accession and Version