U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DX03_RS06020 transglycosylase SLT domain-containing protein [ Stenotrophomonas rhizophila ]

Gene ID: 61475526, updated on 13-May-2024

Summary

Go to the top of the page Help
Gene symbol
DX03_RS06020
Gene description
transglycosylase SLT domain-containing protein
Locus tag
DX03_RS06020
Gene type
protein coding
Organism
Stenotrophomonas rhizophila (strain: DSM 14405, nat-host: Brassica napus, type-material: type strain of Stenotrophomonas rhizophila)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas
Old locus tag
DX03_06125
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP007597.1Genomic Context describing neighboring genes Neighboring gene helicase HerA-like domain-containing protein Neighboring gene transcription elongation factor GreB Neighboring gene ribonuclease E inhibitor RraB Neighboring gene archaetidylserine decarboxylase Neighboring gene SCO family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP007597.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria. Koraimann G. Cell Mol Life Sci, 2003 Nov. PMID 14625683, Free PMC Article
  2. Structure of the 70-kDa soluble lytic transglycosylase complexed with bulgecin A. Implications for the enzymatic mechanism. Thunnissen AM, et al. Biochemistry, 1995 Oct 3. PMID 7548026
  3. A family of lysozyme-like virulence factors in bacterial pathogens of plants and animals. Mushegian AR, et al. Proc Natl Acad Sci U S A, 1996 Jul 9. PMID 8692991, Free PMC Article
  4. A conserved domain in putative bacterial and bacteriophage transglycosylases. Koonin EV, et al. Trends Biochem Sci, 1994 Mar. PMID 8203016

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
transglycosylase SLT domain-containing protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP007597.1 Reference assembly

    Range
    1438453..1440057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_038687186.1 transglycosylase SLT domain-containing protein [Stenotrophomonas rhizophila]

    See identical proteins and their annotated locations for WP_038687186.1

    Conserved Domains (2) summary
    PRK10783
    Location:200 → 529
    mltD; membrane-bound lytic murein transglycosylase D; Provisional
    cl00222
    Location:200 → 330
    Lyz-like; lysozyme-like domains
Nucleotide Protein
Heading Accession and Version