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cas6f type I-F CRISPR-associated endoribonuclease Cas6/Csy4 [ Selenomonas ruminantium subsp. ruminantium ATCC 12561 ]

Gene ID: 61462412, updated on 29-Sep-2023

Summary

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Gene symbol
cas6f
Gene description
type I-F CRISPR-associated endoribonuclease Cas6/Csy4
Locus tag
G598_RS0109655
Gene type
protein coding
Organism
Selenomonas ruminantium subsp. ruminantium ATCC 12561 (strain: ATCC 12561, sub-species: ruminantium, culture-collection: ATCC:12561, type-material: type strain of Selenomonas ruminantium)
Lineage
Bacteria; Bacillota; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas
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Genomic context

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NZ_AUJE01000022.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene type I-F CRISPR-associated protein Csy2 Neighboring gene type I-F CRISPR-associated protein Csy1 Neighboring gene type I-F CRISPR-associated protein Csy3 Neighboring gene glutamate-1-semialdehyde 2,1-aminomutase Neighboring gene porphobilinogen synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_AUJE01000022.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA. Haurwitz RE, et al. EMBO J, 2012 Jun 13. PMID 22522703, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
type I-F CRISPR-associated endoribonuclease Cas6/Csy4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AUJE01000022.1 Reference assembly

    Range
    3216..3752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_157833313.1 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 [Selenomonas ruminantium]

    UniProtKB/TrEMBL
    A0A1I0W7T6
    Conserved Domains (1) summary
    cl09835
    Location:15 → 170
    Cas6_I-F; CRISPR/Cas system-associated RAMP superfamily protein Cas6f