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R3HCC1 R3H domain and coiled-coil containing 1 [ Bos taurus (domestic cattle) ]

Gene ID: 614496, updated on 4-Oct-2024

Summary

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Official Symbol
R3HCC1provided by VGNC
Official Full Name
R3H domain and coiled-coil containing 1provided by VGNC
Primary source
VGNC:VGNC:33609
See related
BGD:BT24852; Ensembl:ENSBTAG00000025830
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See R3HCC1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (70404873..70413062)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112447819 Neighboring gene charged multivesicular body protein 7 Neighboring gene lysyl oxidase like 2 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene ectonucleoside triphosphate diphosphohydrolase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
R3H and coiled-coil domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    70404873..70413062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002689780.6 → XP_002689826.2  R3H and coiled-coil domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_002689826.2

    UniProtKB/TrEMBL
    F1MFT1, F1MFT2
    Related
    ENSBTAP00000036396.6, ENSBTAT00000036539.6
    Conserved Domains (2) summary
    cd02638
    Location:66 → 126
    R3H_unknown_1; R3H domain of a group of eukaryotic proteins with unknown function. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in ...
    cl17169
    Location:366 → 430
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_015472596.3 → XP_015328082.1  R3H and coiled-coil domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    F1MFT1
    Conserved Domains (2) summary
    cl00297
    Location:66 → 117
    R3H; R3H domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. R3H domains are found in proteins together with ATPase domains, SF1 helicase domains, SF2 DEAH helicase domains, Cys-rich ...
    cl17169
    Location:357 → 421
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein Strain
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