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ABHD17A abhydrolase domain containing 17A, depalmitoylase [ Bos taurus (domestic cattle) ]

Gene ID: 614425, updated on 4-Oct-2024

Summary

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Official Symbol
ABHD17Aprovided by VGNC
Official Full Name
abhydrolase domain containing 17A, depalmitoylaseprovided by VGNC
Primary source
VGNC:VGNC:25497
See related
Ensembl:ENSBTAG00000025277
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
FAM108A; FAM108A1
Orthologs
human mouse all
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Genomic context

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See ABHD17A in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (44190926..44199140, complement)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112447414 Neighboring gene RNA exonuclease 1 homolog Neighboring gene KLF transcription factor 16 Neighboring gene secretory carrier membrane protein 4 Neighboring gene adenosine deaminase tRNA specific 3 Neighboring gene casein kinase 1 gamma 2 Neighboring gene microRNA mir-6120

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC138013

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha/beta hydrolase domain-containing protein 17A
Names
abhydrolase domain-containing protein 17A
abhydrolase domain-containing protein FAM108A
abhydrolase domain-containing protein FAM108A1
family with sequence similarity 108, member A1
protein ABHD17A
NP_001040001.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046536.1 → NP_001040001.1  alpha/beta hydrolase domain-containing protein 17A

    See identical proteins and their annotated locations for NP_001040001.1

    Status: PROVISIONAL

    Source sequence(s)
    BC113352
    UniProtKB/Swiss-Prot
    Q2HJ19
    Related
    ENSBTAP00000035338.3, ENSBTAT00000035463.5
    Conserved Domains (2) summary
    pfam12146
    Location:110 → 284
    Hydrolase_4; Serine aminopeptidase, S33
    pfam12695
    Location:113 → 285
    Abhydrolase_5; Alpha/beta hydrolase family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    44190926..44199140 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2HJ19.1 GenPept UniProtKB/Swiss-Prot:Q2HJ19

Gene LinkOut

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Molecular Biology Databases
Research Materials