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ANAPC13 anaphase promoting complex subunit 13 [ Bos taurus (domestic cattle) ]

Gene ID: 614347, updated on 4-Oct-2024

Summary

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Official Symbol
ANAPC13provided by VGNC
Official Full Name
anaphase promoting complex subunit 13provided by VGNC
Primary source
VGNC:VGNC:25881
See related
Ensembl:ENSBTAG00000014461
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ANAPC13 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (134839085..134845010)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132345902 Neighboring gene kyphoscoliosis peptidase Neighboring gene centrosomal protein 63 Neighboring gene angiomotin like 2 Neighboring gene receptor like tyrosine kinase Neighboring gene geranylgeranyl transferase type-1 subunit beta-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of ANAPC13 gene polymorphisms associated with body measurement traits in Bos taurus. Jiang BJ, et al. Genet Mol Res, 2012 Aug 29. PMID 22782628
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Polymorphisms and mutations in non-coding regions of the ANAPC13 gene significantly affect body measurement traits.
    Title: Identification of ANAPC13 gene polymorphisms associated with body measurement traits in Bos taurus.
Submit: New GeneRIF Correction

General gene information

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Homology

Clone Names

  • MGC137060

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein K11-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of anaphase-promoting complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anaphase-promoting complex subunit 13
Names
APC13
cyclosome subunit 13
cylosome subunit 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113229.2 → NP_001106700.1  anaphase-promoting complex subunit 13

    See identical proteins and their annotated locations for NP_001106700.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    FE003831, NKLS02000001
    UniProtKB/Swiss-Prot
    Q2NKV2
    Conserved Domains (1) summary
    pfam05839
    Location:1 → 74
    Apc13p; Apc13p protein

  2. NM_001113234.2 → NP_001106705.1  anaphase-promoting complex subunit 13

    See identical proteins and their annotated locations for NP_001106705.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer variant. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    NKLS02000001
    UniProtKB/Swiss-Prot
    Q2NKV2
    Related
    ENSBTAP00000019228.4, ENSBTAT00000019228.5
    Conserved Domains (1) summary
    pfam05839
    Location:1 → 74
    Apc13p; Apc13p protein

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    134839085..134845010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059886407.1 → XP_059742390.1  anaphase-promoting complex subunit 13 isoform X1

    UniProtKB/Swiss-Prot
    Q2NKV2

  2. XM_005201932.5 → XP_005201989.1  anaphase-promoting complex subunit 13 isoform X1

    See identical proteins and their annotated locations for XP_005201989.1

    UniProtKB/Swiss-Prot
    Q2NKV2
    Conserved Domains (1) summary
    pfam05839
    Location:1 → 74
    Apc13p; Apc13p protein

  3. XM_005201931.5 → XP_005201988.1  anaphase-promoting complex subunit 13 isoform X1

    See identical proteins and their annotated locations for XP_005201988.1

    UniProtKB/Swiss-Prot
    Q2NKV2
    Conserved Domains (1) summary
    pfam05839
    Location:1 → 74
    Apc13p; Apc13p protein

  4. XM_005201934.5 → XP_005201991.1  anaphase-promoting complex subunit 13 isoform X1

    See identical proteins and their annotated locations for XP_005201991.1

    UniProtKB/Swiss-Prot
    Q2NKV2
    Conserved Domains (1) summary
    pfam05839
    Location:1 → 74
    Apc13p; Apc13p protein
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2NKV2.1 GenPept UniProtKB/Swiss-Prot:Q2NKV2

Gene LinkOut

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