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RPS4X ribosomal protein S4 X-linked [ Bos taurus (domestic cattle) ]

Gene ID: 614241, updated on 4-Oct-2024

Summary

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Gene symbol
RPS4X
Gene description
ribosomal protein S4 X-linked
See related
BGD:BT15199; Ensembl:ENSBTAG00000018800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
RPS4
Orthologs
human mouse all
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Genomic context

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See RPS4X in Genome Data Viewer
Location:
chromosome: X
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (78400272..78404695)

Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene histone deacetylase 8 Neighboring gene Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 Neighboring gene ERCC excision repair 6 like, spindle assembly checkpoint helicase Neighboring gene peptidylprolyl cis/trans isomerase, NIMA-interacting 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differences in the pattern of X-linked gene expression between fetal bovine muscle and fibroblast cultures derived from the same muscle biopsies. Nino-Soto MI, et al. Cytogenet Genome Res, 2005. PMID 16093722
  2. Mapping of 12 bovine ribosomal protein genes using a bovine radiation hybrid panel. Wang YH, et al. Anim Genet, 2001 Oct. PMID 11683713
  3. Relationship between the monosomy X phenotype and Y-linked ribosomal protein S4 (Rps4) in several species of mammals: a molecular evolutionary analysis of Rps4 homologs. Omoe K, et al. Genomics, 1996 Jan 1. PMID 8808278
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC127573

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein eS4
Names
40S ribosomal protein S4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035445.2 → NP_001030522.1  small ribosomal subunit protein eS4

    See identical proteins and their annotated locations for NP_001030522.1

    Status: PROVISIONAL

    Source sequence(s)
    BC102476
    UniProtKB/Swiss-Prot
    A5PJ76, P79103, Q3T0A5
    UniProtKB/TrEMBL
    F1MJH2
    Related
    ENSBTAP00000025024.4, ENSBTAT00000025024.6
    Conserved Domains (1) summary
    PLN00036
    Location:1 → 260
    PLN00036; 40S ribosomal protein S4; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    78400272..78404695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P79103.3 GenPept UniProtKB/Swiss-Prot:P79103

Gene LinkOut

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