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BJK05_RS22885 Trm112 family protein [ Pectobacterium polaris ]

Gene ID: 61411368, updated on 29-Jul-2024

Summary

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Gene symbol
BJK05_RS22885
Gene description
Trm112 family protein
Locus tag
BJK05_RS22885
Gene type
protein coding
Organism
Pectobacterium polaris (strain: NIBIO1392, nat-host: Solanum tuberosum)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
Old locus tag
BJK05_03885
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Genomic context

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NZ_CP017482.1Genomic Context describing neighboring genes Neighboring gene ComEC family protein Neighboring gene lipid A ABC transporter ATP-binding protein/permease MsbA Neighboring gene tetraacyldisaccharide 4'-kinase Neighboring gene 3-deoxy-manno-octulosonate cytidylyltransferase Neighboring gene pectate lyase PelN Neighboring gene YcbJ family phosphotransferase Neighboring gene envelope biogenesis factor ElyC

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP017482.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into molecular plasticity in protein complexes from Trm9-Trm112 tRNA modifying enzyme crystal structure. Létoquart J, et al. Nucleic Acids Res, 2015 Dec 15. PMID 26438534, Free PMC Article
  2. The zinc finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast. Heurgué-Hamard V, et al. J Biol Chem, 2006 Nov 24. PMID 17008308
  3. Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA. Purushothaman SK, et al. Mol Cell Biol, 2005 Jun. PMID 15899842, Free PMC Article
  4. Pectobacterium polaris sp. nov., isolated from potato (Solanum tuberosum). Dees MW, et al. Int J Syst Evol Microbiol, 2017 Dec. PMID 29068285

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Trm112 family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP017482.1 Reference assembly

    Range
    895815..895997
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005967647.1 MULTISPECIES: Trm112 family protein [Pectobacterium]

    See identical proteins and their annotated locations for WP_005967647.1

    UniProtKB/TrEMBL
    A0A086E6Q8, A0A093S2W5, A0A0H3I408, A0A1M5GBY3, A0A1V2R5N6, A0A221T962, A0A7V8PJB9, A0A7W2E0Y2, A0A9Q2ID59, A0A9X8P5P8, A0AA40J2R1, A0AA85ZIP7, A0AA93DM67
    Conserved Domains (1) summary
    cl01066
    Location:1 → 57
    Trm112p; Trm112p-like protein
Nucleotide Protein
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