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ispU (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase [ Pectobacterium polaris ]

Gene ID: 61411334, updated on 10-Oct-2024

Summary

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Gene symbol
ispU
Gene description
(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase
Locus tag
BJK05_RS22490
Gene type
protein coding
Organism
Pectobacterium polaris (strain: NIBIO1392, nat-host: Solanum tuberosum)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
Also known as
uppS
Old locus tag
BJK05_21825
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Genomic context

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NZ_CP017482.1Genomic Context describing neighboring genes Neighboring gene ribosome recycling factor Neighboring gene 1-deoxy-D-xylulose-5-phosphate reductoisomerase Neighboring gene phosphatidate cytidylyltransferase Neighboring gene sigma E protease regulator RseP

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP017482.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substrate binding mode and reaction mechanism of undecaprenyl pyrophosphate synthase deduced from crystallographic studies. Chang SY, et al. Protein Sci, 2004 Apr. PMID 15044730, Free PMC Article
  2. Catalytic mechanism revealed by the crystal structure of undecaprenyl pyrophosphate synthase in complex with sulfate, magnesium, and triton. Chang SY, et al. J Biol Chem, 2003 Aug 1. PMID 12756244
  3. Pectobacterium polaris sp. nov., isolated from potato (Solanum tuberosum). Dees MW, et al. Int J Syst Evol Microbiol, 2017 Dec. PMID 29068285

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP017482.1 Reference assembly

    Range
    4994542..4995303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_014914449.1 MULTISPECIES: (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase [Pectobacterium]

    See identical proteins and their annotated locations for WP_014914449.1

    UniProtKB/TrEMBL
    A0A094U2D7, A0A433NC57, A0AAQ0S347, A0AAQ0WWH1
    Conserved Domains (1) summary
    cl00230
    Location:24 → 252
    Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases
Nucleotide Protein
Heading Accession and Version

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