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dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [ Pectobacterium polaris ]

Gene ID: 61411326, updated on 29-Jul-2024

Summary

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Gene symbol
dapD
Gene description
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
Locus tag
BJK05_RS22450
Gene type
protein coding
Organism
Pectobacterium polaris (strain: NIBIO1392, nat-host: Solanum tuberosum)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
Old locus tag
BJK05_21785
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Genomic context

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NZ_CP017482.1Genomic Context describing neighboring genes Neighboring gene flavodoxin Neighboring gene DUF3461 family protein Neighboring gene bifunctional uridylyltransferase/uridylyl-removing protein GlnD Neighboring gene type I methionyl aminopeptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP017482.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A possible role for acetylated intermediates in diaminopimelate and tabtoxinine-beta-lactam biosynthesis in Pseudomonas syringae pv. tabaci BR2.024. Liu L, et al. J Bacteriol, 1997 Sep. PMID 9294453, Free PMC Article
  2. Pectobacterium polaris sp. nov., isolated from potato (Solanum tuberosum). Dees MW, et al. Int J Syst Evol Microbiol, 2017 Dec. PMID 29068285

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
WP_010284812.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP017482.1 Reference assembly

    Range
    4984860..4985687 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010284812.1 MULTISPECIES: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [Pectobacterium]

    See identical proteins and their annotated locations for WP_010284812.1

    UniProtKB/TrEMBL
    A0A0M2F469
    Conserved Domains (1) summary
    PRK11830
    Location:3 → 272
    dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional
Nucleotide Protein
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