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ZNF148 zinc finger protein 148 [ Bos taurus (domestic cattle) ]

Gene ID: 613265, updated on 4-Oct-2024

Summary

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Official Symbol
ZNF148provided by VGNC
Official Full Name
zinc finger protein 148provided by VGNC
Primary source
VGNC:VGNC:37212
See related
BGD:BT10277; Ensembl:ENSBTAG00000050482
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ZNF148 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (69681021..69827618, complement)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene heart development protein with EGF like domains 1 Neighboring gene solute carrier family 12 member 8 Neighboring gene uncharacterized LOC132345644 Neighboring gene sorting nexin 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of zinc finger binding protein 89 (ZBP-89) as a transcriptional activator for a major bovine growth hormone receptor promoter. Xu Q, et al. Mol Cell Endocrinol, 2006 Jun 7. PMID 16621236
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 148
Names
transcription factor ZBP-89
zinc finger DNA-binding protein 89
zinc finger binding protein 89

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033121.1 → NP_001028293.1  zinc finger protein 148

    See identical proteins and their annotated locations for NP_001028293.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ162621
    UniProtKB/Swiss-Prot
    Q3Y4E1
    Related
    ENSBTAP00000067678.1, ENSBTAT00000070820.2
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    69681021..69827618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010801188.4 → XP_010799490.1  zinc finger protein 148 isoform X2

    See identical proteins and their annotated locations for XP_010799490.1

    Conserved Domains (3) summary
    sd00017
    Location:46 → 66
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:44 → 66
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:87 → 111
    zf-H2C2_2; Zinc-finger double domain

  2. XM_005201416.5 → XP_005201473.1  zinc finger protein 148 isoform X1

    See identical proteins and their annotated locations for XP_005201473.1

    UniProtKB/TrEMBL
    A0A3Q1M2M3
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

  3. XM_005201423.5 → XP_005201480.1  zinc finger protein 148 isoform X1

    See identical proteins and their annotated locations for XP_005201480.1

    UniProtKB/TrEMBL
    A0A3Q1M2M3
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

  4. XM_005201422.5 → XP_005201479.1  zinc finger protein 148 isoform X1

    See identical proteins and their annotated locations for XP_005201479.1

    UniProtKB/TrEMBL
    A0A3Q1M2M3
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

  5. XM_010801187.4 → XP_010799489.1  zinc finger protein 148 isoform X1

    See identical proteins and their annotated locations for XP_010799489.1

    UniProtKB/TrEMBL
    A0A3Q1M2M3
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

  6. XM_024991587.2 → XP_024847355.1  zinc finger protein 148 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M2M3
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

  7. XM_024991582.2 → XP_024847350.1  zinc finger protein 148 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M2M3
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

  8. XM_059886238.1 → XP_059742221.1  zinc finger protein 148 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M2M3

  9. XM_059886230.1 → XP_059742213.1  zinc finger protein 148 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M2M3

  10. XM_059886236.1 → XP_059742219.1  zinc finger protein 148 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M2M3

  11. XM_005201417.5 → XP_005201474.1  zinc finger protein 148 isoform X1

    See identical proteins and their annotated locations for XP_005201474.1

    UniProtKB/TrEMBL
    A0A3Q1M2M3
    Conserved Domains (3) summary
    sd00017
    Location:173 → 193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:171 → 193
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:214 → 238
    zf-H2C2_2; Zinc-finger double domain

  12. XM_059886240.1 → XP_059742223.1  zinc finger protein 148 isoform X3

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3Y4E1.1 GenPept UniProtKB/Swiss-Prot:Q3Y4E1

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