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ssb single strand DNA binding protein [ Salmonella phage Vi II-E1 ]

Gene ID: 6128889, updated on 8-Jan-2023

Summary

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Gene symbol
ssb
Gene description
single strand DNA binding protein
Locus tag
VIP0041
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella phage Vi II-E1 (nat-host: Salmonella enterica)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Macdonaldcampvirus; Macdonaldcampvirus ViIIE1
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Genomic context

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Sequence:
NC_010495.1 (32685..33170, complement)

NC_010495.1Genomic Context describing neighboring genes Neighboring gene homing endonuclease Neighboring gene tail fiber protein Neighboring gene Erf-like ssDNA annealing protein Neighboring gene exonuclease VIII

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010495.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of the Salmonella enterica serovar Typhi Vi-typing bacteriophage E1. Pickard D, et al. J Bacteriol, 2008 Apr. PMID 18192390, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: c33017-32988 PS00736 Single-strand binding protein family signature 2. inference = protein motif:Prosite:PS00736
  • Loc: c33158-32841 Pfam match to entry PF00436.11 SSB, score 127.7,E-value 2.8e-35 inference = protein motif:Pfam:PF00436.11

General protein information

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Preferred Names
single strand DNA binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010495.1 Reference assembly

    Range
    32685..33170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001742078.1 single strand DNA binding protein [Salmonella phage Vi II-E1]

    See identical proteins and their annotated locations for YP_001742078.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B1GS51
    Conserved Domains (2) summary
    COG0629
    Location:4 → 161
    Ssb; Single-stranded DNA-binding protein [Replication, recombination and repair]
    cl09930
    Location:1 → 161
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Nucleotide Protein
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