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MRPL53 mitochondrial ribosomal protein L53 [ Canis lupus familiaris (dog) ]

Gene ID: 612261, updated on 5-Mar-2024

Summary

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Gene symbol
MRPL53
Gene description
mitochondrial ribosomal protein L53
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See MRPL53 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49522699..49525326)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48305344..48307970)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49164289..49166915)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48539822..48542449)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48606586..48609212)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 1 Neighboring gene uncharacterized LOC119869720 Neighboring gene ladybird homeobox 2 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene coiled-coil domain containing 142 Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene WW domain binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L53, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    49522699..49525326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038691668.1 → XP_038547596.1  39S ribosomal protein L53, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0KN16, A0A8C0QM52
    Conserved Domains (1) summary
    pfam10780
    Location:20 → 71
    MRP_L53; 39S ribosomal protein L53/MRP-L53

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    48539822..48542449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038499109.1 → XP_038355037.1  39S ribosomal protein L53, mitochondrial

    Conserved Domains (1) summary
    pfam10780
    Location:20 → 71
    MRP_L53; 39S ribosomal protein L53/MRP-L53

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    48606586..48609212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038625739.1 → XP_038481667.1  39S ribosomal protein L53, mitochondrial

    Conserved Domains (1) summary
    pfam10780
    Location:20 → 71
    MRP_L53; 39S ribosomal protein L53/MRP-L53

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    49164289..49166915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038561697.1 → XP_038417625.1  39S ribosomal protein L53, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0KN16, A0A8C0QM52
    Conserved Domains (1) summary
    pfam10780
    Location:20 → 71
    MRP_L53; 39S ribosomal protein L53/MRP-L53

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48305344..48307970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_850000.6 → XP_855093.1  39S ribosomal protein L53, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0KN16, A0A8C0QM52
    Conserved Domains (1) summary
    pfam10780
    Location:20 → 71
    MRP_L53; 39S ribosomal protein L53/MRP-L53
Nucleotide Protein
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