U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRADD TNFRSF1A associated via death domain [ Canis lupus familiaris (dog) ]

Gene ID: 611262, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
TRADDprovided by VGNC
Official Full Name
TNFRSF1A associated via death domainprovided by VGNC
Primary source
VGNC:VGNC:47761
See related
Ensembl:ENSCAFG00845010243
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRADD in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (82634875..82645756)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (82189185..82200059)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (82785778..82796660)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (82460961..82471833)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (82146502..82157169)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096057 Neighboring gene exocyst complex component 3 like 1 Neighboring gene microtubule associated tyrosine carboxypeptidase 1 Neighboring gene heat shock transcription factor 4 Neighboring gene F-box and leucine rich repeat protein 8 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 Neighboring gene phagosome assembly factor 1 Neighboring gene core-binding factor subunit beta

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane receptor protein tyrosine kinase adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tumor necrosis factor receptor superfamily complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tumor necrosis factor receptor type 1-associated DEATH domain protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    82634875..82645756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038667430.1 → XP_038523358.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8I3NEJ2, A0A8P0SPI1
    Related
    ENSCAFP00845014037.1, ENSCAFT00845018019.1
    Conserved Domains (2) summary
    pfam09034
    Location:79 → 188
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:243 → 332
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_038667432.1 → XP_038523360.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0T0X4
    Related
    ENSCAFP00845014064.1, ENSCAFT00845018053.1
    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

  3. XM_038667431.1 → XP_038523359.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0R3C9
    Conserved Domains (2) summary
    pfam09034
    Location:62 → 171
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:226 → 315
    DD; Death Domain Superfamily of protein-protein interaction domains

  4. XM_038667433.1 → XP_038523361.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0T0X4
    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    82460961..82471833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038477507.1 → XP_038333435.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1

    Conserved Domains (2) summary
    pfam09034
    Location:79 → 188
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:243 → 332
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_038477509.1 → XP_038333437.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

  3. XM_038477508.1 → XP_038333436.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X2

    Conserved Domains (2) summary
    pfam09034
    Location:62 → 171
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:226 → 315
    DD; Death Domain Superfamily of protein-protein interaction domains

  4. XM_038477510.1 → XP_038333438.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    82146502..82157169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038602826.1 → XP_038458754.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1

    Conserved Domains (2) summary
    pfam09034
    Location:79 → 188
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:243 → 332
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_038602828.1 → XP_038458756.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

  3. XM_038602827.1 → XP_038458755.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X2

    Conserved Domains (2) summary
    pfam09034
    Location:62 → 171
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:226 → 315
    DD; Death Domain Superfamily of protein-protein interaction domains

  4. XM_038602829.1 → XP_038458757.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    82785778..82796660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538723.1 → XP_038394651.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8I3NEJ2, A0A8P0SPI1
    Conserved Domains (2) summary
    pfam09034
    Location:79 → 188
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:243 → 332
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_038538725.1 → XP_038394653.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0T0X4
    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

  3. XM_038538724.1 → XP_038394652.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0R3C9
    Conserved Domains (2) summary
    pfam09034
    Location:62 → 171
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:226 → 315
    DD; Death Domain Superfamily of protein-protein interaction domains

  4. XM_038538726.1 → XP_038394654.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0T0X4
    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    82189185..82200059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014114114.3 → XP_013969589.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8I3NEJ2, A0A8P0SPI1
    Conserved Domains (2) summary
    pfam09034
    Location:79 → 188
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:243 → 332
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_848905.6 → XP_853998.2  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0T0X4
    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains

  3. XM_005620856.4 → XP_005620913.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0R3C9
    Conserved Domains (2) summary
    pfam09034
    Location:62 → 171
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:226 → 315
    DD; Death Domain Superfamily of protein-protein interaction domains

  4. XM_038531061.1 → XP_038386989.1  tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0MZI9, A0A8C0T0X4
    Conserved Domains (2) summary
    pfam09034
    Location:51 → 160
    TRADD_N; TRADD, N-terminal domain
    cl14633
    Location:215 → 304
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.