U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SGPP2 sphingosine-1-phosphate phosphatase 2 [ Canis lupus familiaris (dog) ]

Gene ID: 610884, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SGPP2provided by VGNC
Official Full Name
sphingosine-1-phosphate phosphatase 2provided by VGNC
Primary source
VGNC:VGNC:57395
See related
Ensembl:ENSCAFG00845017440
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SGPP2 in Genome Data Viewer
Location:
chromosome: 37
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (28560624..28662588)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (29372695..29474494)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (28422422..28524202)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (28472739..28574349)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (28404302..28505973)

Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene paired box 3 Neighboring gene uncharacterized LOC106558331 Neighboring gene uncharacterized LOC119867969 Neighboring gene uncharacterized LOC102151946 Neighboring gene phenylalanyl-tRNA synthetase subunit beta Neighboring gene uncharacterized LOC102151990 Neighboring gene monoacylglycerol O-acyltransferase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: sphingosine-1-phosphate phosphatase 2; sphingosine-1-phosphate phosphatase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051841.1 Reference ROS_Cfam_1.0

    Range
    28560624..28662588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038448079.1 → XP_038304007.1  sphingosine-1-phosphate phosphatase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LSN9
    Related
    ENSCAFP00845024212.1, ENSCAFT00845030891.1
    Conserved Domains (1) summary
    cd03388
    Location:73 → 222
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...

  2. XM_038448081.1 → XP_038304009.1  sphingosine-1-phosphate phosphatase 2 isoform X2

    Conserved Domains (1) summary
    cd03388
    Location:1 → 105
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...

  3. XM_038448080.1 → XP_038304008.1  sphingosine-1-phosphate phosphatase 2 isoform X2

    Conserved Domains (1) summary
    cd03388
    Location:1 → 105
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049297.1 Alternate UMICH_Zoey_3.1

    Range
    28472739..28574349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038522069.1 → XP_038377997.1  sphingosine-1-phosphate phosphatase 2 isoform X3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

    Range
    28404302..28505973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038650249.1 → XP_038506177.1  sphingosine-1-phosphate phosphatase 2 isoform X4

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

    Range
    28422422..28524202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585872.1 → XP_038441800.1  LOW QUALITY PROTEIN: sphingosine-1-phosphate phosphatase 2 isoform X5

    UniProtKB/TrEMBL
    A0A8C0RJU0

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    29372695..29474494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038463624.1 → XP_038319552.1  sphingosine-1-phosphate phosphatase 2 isoform X6

    Conserved Domains (1) summary
    cd03388
    Location:73 → 205
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.