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PITPNM1 phosphatidylinositol transfer protein membrane associated 1 [ Canis lupus familiaris (dog) ]

Gene ID: 610462, updated on 17-Aug-2024

Summary

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Official Symbol
PITPNM1provided by VGNC
Official Full Name
phosphatidylinositol transfer protein membrane associated 1provided by VGNC
Primary source
VGNC:VGNC:44586
See related
Ensembl:ENSCAFG00845009575
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PITPNM1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
25
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (50895386..50908431)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (48583499..48596532)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (50477463..50490539)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (50108692..50121768)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (49683223..49696286)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene calcium binding protein 2 Neighboring gene uncharacterized LOC111090991 Neighboring gene cyclin dependent kinase 2 associated protein 2 Neighboring gene aryl hydrocarbon receptor interacting protein Neighboring gene uncharacterized LOC111090992 Neighboring gene transmembrane protein 134

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
membrane-associated phosphatidylinositol transfer protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    50895386..50908431
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038424796.1 → XP_038280724.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JM15, A0A8C0P6F2, A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  2. XM_038424795.1 → XP_038280723.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JM15, A0A8C0P6F2, A0A8C0S846
    Related
    ENSCAFP00845013385.1, ENSCAFT00845017177.1
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  3. XM_038424797.1 → XP_038280725.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1023 → 1154
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:689 → 879
    DDHD; DDHD domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    50108692..50121768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038501038.1 → XP_038356966.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  2. XM_038501037.1 → XP_038356965.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  3. XM_038501039.1 → XP_038356967.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X2

    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1023 → 1154
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:689 → 879
    DDHD; DDHD domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    49683223..49696286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038627849.1 → XP_038483777.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  2. XM_038627850.1 → XP_038483778.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X2

    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1023 → 1154
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:689 → 879
    DDHD; DDHD domain

  3. XM_038627848.1 → XP_038483776.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    50477463..50490539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038563738.1 → XP_038419666.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JM15, A0A8C0P6F2, A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  2. XM_038563737.1 → XP_038419665.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JM15, A0A8C0P6F2, A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  3. XM_038563739.1 → XP_038419667.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1023 → 1154
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:689 → 879
    DDHD; DDHD domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48583499..48596532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038454049.1 → XP_038309977.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JM15, A0A8C0P6F2, A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  2. XM_846736.6 → XP_851829.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JM15, A0A8C0P6F2, A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1024 → 1155
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:690 → 880
    DDHD; DDHD domain

  3. XM_005631398.4 → XP_005631455.1  membrane-associated phosphatidylinositol transfer protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0S846
    Conserved Domains (3) summary
    cd08889
    Location:1 → 257
    SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
    smart00775
    Location:1023 → 1154
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:689 → 879
    DDHD; DDHD domain
Nucleotide Protein
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