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Bma-sgca-1 Uncharacterized protein [ Brugia malayi ]

Gene ID: 6101101, updated on 7-Dec-2023

Summary

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Gene symbol
Bma-sgca-1
Gene description
Uncharacterized protein
Locus tag
BM_BM4670
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brugia malayi (strain: FR3)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Brugia
Old locus tag
Bm1_31045
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Genomic context

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See Bma-sgca-1 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
9

NW_025062479.1Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025062479.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome of the filarial nematode parasite Brugia malayi. Ghedin E, et al. Science, 2007 Sep 21. PMID 17885136, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Uncharacterized protein
XP_001897652.1
  • Confirmed by transcript evidence
XP_042930511.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_025062479.1 Reference assembly

    Range
    12243582..12246359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001897617.2 → XP_001897652.1  Uncharacterized protein BM_BM4670 [Brugia malayi]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H5S2K9, A0A4E9EUN5, A0A5S6PMZ0
    Conserved Domains (1) summary
    pfam05510
    Location:35 → 398
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_043074577.1 → XP_042930511.1  Uncharacterized protein BM_BM4670 [Brugia malayi]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A4E9EWL9, A0A5S6PMY1
    Conserved Domains (1) summary
    pfam05510
    Location:35 → 241
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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