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CERS1 ceramide synthase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 609789, updated on 22-Jan-2024

Summary

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Gene symbol
CERS1
Gene description
ceramide synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
LASS1
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Genomic context

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See CERS1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (44702943..44712260)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (44131420..44140737)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (44625909..44635225)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (43940230..43949547)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (44350440..44359760)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene COPI coat complex subunit epsilon Neighboring gene ceramide synthase 1-like Neighboring gene growth differentiation factor 1 Neighboring gene UPF1 RNA helicase and ATPase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LAG1 longevity assurance homolog 1; ceramide synthase 1
Names
LAG1 homolog, ceramide synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    44702943..44712260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428107.1 → XP_038284035.1  ceramide synthase 1

    Conserved Domains (1) summary
    smart00724
    Location:85 → 298
    TLC; TRAM, LAG1 and CLN8 homology domains

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    43940230..43949547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038503766.1 → XP_038359694.1  ceramide synthase 1

    Conserved Domains (1) summary
    smart00724
    Location:85 → 298
    TLC; TRAM, LAG1 and CLN8 homology domains

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    44350440..44359760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038630932.1 → XP_038486860.1  ceramide synthase 1

    Conserved Domains (1) summary
    smart00724
    Location:85 → 298
    TLC; TRAM, LAG1 and CLN8 homology domains

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    44625909..44635225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038566791.1 → XP_038422719.1  ceramide synthase 1

    Conserved Domains (1) summary
    smart00724
    Location:85 → 298
    TLC; TRAM, LAG1 and CLN8 homology domains

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    44131420..44140737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038455054.1 → XP_038310982.1  ceramide synthase 1

    Conserved Domains (1) summary
    smart00724
    Location:85 → 298
    TLC; TRAM, LAG1 and CLN8 homology domains
Nucleotide Protein
Heading Accession and Version

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