U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Bm6377 DNA polymerase family B containing protein;Uncharacterized protein [ Brugia malayi ]

Gene ID: 6096790, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
Bm6377
Gene description
DNA polymerase family B containing protein;Uncharacterized protein
Locus tag
BM_BM6377
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brugia malayi (strain: FR3)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Brugia
Old locus tag
Bm1_09315
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Bm6377 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
33

NW_025062479.1Genomic Context describing neighboring genes Neighboring gene Histone deacetylase 1, putative Neighboring gene GTP-ase activating protein for Arf containing protein Neighboring gene uncharacterized protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_025062479.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Draft genome of the filarial nematode parasite Brugia malayi. Ghedin E, et al. Science, 2007 Sep 21. PMID 17885136, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in error-prone translesion synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of zeta DNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA polymerase family B containing protein;Uncharacterized protein
XP_042931519.1
  • Partially confirmed by transcript evidence
XP_042931520.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_025062479.1 Reference assembly

    Range
    20836972..20847481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043075585.1 → XP_042931519.1  DNA polymerase family B containing protein [Brugia malayi]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0K0JMX7, A0A4E9F0K2
    Conserved Domains (3) summary
    cd05534
    Location:890 → 1339
    POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
    smart00486
    Location:643 → 1129
    POLBc; DNA polymerase type-B family
    PTZ00166
    Location:11 → 209
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

  2. XM_043075586.1 → XP_042931520.1  Uncharacterized protein BM_BM6377 [Brugia malayi]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A4E9EYP9, A0A5S6PSV2
    Conserved Domains (3) summary
    cd05534
    Location:884 → 1333
    POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
    smart00486
    Location:637 → 1123
    POLBc; DNA polymerase type-B family
    PTZ00166
    Location:11 → 209
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials