U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FE838_RS10375 rhamnogalacturonan lyase [ Bacteroides thetaiotaomicron ]

Gene ID: 60925349, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
FE838_RS10375
Gene description
rhamnogalacturonan lyase
Locus tag
FE838_RS10375
Gene type
protein coding
Organism
Bacteroides thetaiotaomicron (strain: DSM 2079, nat-host: Homo sapiens, culture-collection: DSM:2079, type-material: type strain of Bacteroides thetaiotaomicron)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Old locus tag
FE838_10825
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP040530.1Genomic Context describing neighboring genes Neighboring gene rhamnogalacturonan acetylesterase Neighboring gene glycoside hydrolase family 88 protein Neighboring gene glycoside hydrolase family 88 protein Neighboring gene L-rhamnose mutarotase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP040530.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
rhamnogalacturonan lyase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP040530.1 Reference assembly

    Range
    2798233..2800074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_008764392.1 MULTISPECIES: rhamnogalacturonan lyase [Bacteroides]

    See identical proteins and their annotated locations for WP_008764392.1

    UniProtKB/TrEMBL
    A0A0P0FRW5, C6ILI7, Q8A046
    Conserved Domains (1) summary
    cd10318
    Location:31 → 594
    RGL11; Rhamnogalacturonan lyase of the polysaccharide lyase family 11
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.