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FE838_RS07995 glycoside hydrolase family 13 protein [ Bacteroides thetaiotaomicron ]

Gene ID: 60924873, updated on 24-Oct-2024

Summary

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Gene symbol
FE838_RS07995
Gene description
glycoside hydrolase family 13 protein
Locus tag
FE838_RS07995
Gene type
protein coding
Organism
Bacteroides thetaiotaomicron (strain: DSM 2079, nat-host: Homo sapiens, culture-collection: DSM:2079, type-material: type strain of Bacteroides thetaiotaomicron)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Old locus tag
FE838_08385
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Genomic context

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NZ_CP040530.1Genomic Context describing neighboring genes Neighboring gene starch-utilizationTonB-dependent receptor SusC Neighboring gene glycoside hydrolase family 97 protein Neighboring gene DUF6377 domain-containing protein Neighboring gene IS3 family transposase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP040530.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of the sequence motif of glycoside hydrolase 13 family members. Kumar V. Bioinformation, 2011 Mar 26. PMID 21544166, Free PMC Article
  2. Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of alpha-amylase-related proteins. Stam MR, et al. Protein Eng Des Sel, 2006 Dec. PMID 17085431
  3. Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes. MacGregor EA, et al. Biochim Biophys Acta, 2001 Mar 9. PMID 11257505

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
glycoside hydrolase family 13 protein
WP_008767002.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP040530.1 Reference assembly

    Range
    2114377..2116230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_008767002.1 glycoside hydrolase family 13 protein [Bacteroides thetaiotaomicron]

    See identical proteins and their annotated locations for WP_008767002.1

    UniProtKB/Swiss-Prot
    P71093, Q8A1G0
    UniProtKB/TrEMBL
    A0A0P0FJR7, A0A6I0SBQ4, C6IPX0
    Conserved Domains (3) summary
    cd11340
    Location:123 → 533
    AmyAc_bac_CMD_like_3; Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins
    pfam09087
    Location:28 → 113
    Cyc-maltodext_N; Cyclomaltodextrinase, N-terminal
    pfam10438
    Location:542 → 615
    Cyc-maltodext_C; Cyclo-malto-dextrinase C-terminal domain
Nucleotide Protein
Heading Accession and Version

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