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GFRA4 GDNF family receptor alpha 4 [ Canis lupus familiaris (dog) ]

Gene ID: 609182, updated on 17-Aug-2024

Summary

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Official Symbol
GFRA4provided by VGNC
Official Full Name
GDNF family receptor alpha 4provided by VGNC
Primary source
VGNC:VGNC:49680
See related
Ensembl:ENSCAFG00845014527
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See GFRA4 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (18104690..18109573)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (17515732..17520613)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (18138277..18143160)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (17699436..17704303)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (17811187..17816066)

Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S30-like Neighboring gene heat shock protein family A (Hsp70) member 12B Neighboring gene sialic acid binding Ig like lectin 1 Neighboring gene uncharacterized LOC111092057 Neighboring gene ADAM metallopeptidase domain 33 Neighboring gene attractin Neighboring gene protein FAM133B-like Neighboring gene uncharacterized LOC106557679

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glial cell-derived neurotrophic factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051828.1 Reference ROS_Cfam_1.0

    Range
    18104690..18109573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038433260.1 → XP_038289188.1  GDNF family receptor alpha-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JP04
    Conserved Domains (1) summary
    pfam02351
    Location:218 → 259
    GDNF; GDNF/GAS1 domain

  2. XM_038433259.1 → XP_038289187.1  GDNF family receptor alpha-4 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JP04, A0A8C0RS90, A0A8I3S0X9
    Related
    ENSCAFP00845020492.1, ENSCAFT00845025994.1
    Conserved Domains (2) summary
    smart00907
    Location:31 → 110
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:122 → 216
    GDNF; GDNF/GAS1 domain

RNA

  1. XR_005300786.1 RNA Sequence

  2. XR_005300787.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049284.1 Alternate UMICH_Zoey_3.1

    Range
    17699436..17704303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038508461.1 → XP_038364389.1  GDNF family receptor alpha-4 isoform X3

  2. XM_038508460.1 → XP_038364388.1  GDNF family receptor alpha-4 isoform X3

  3. XM_038508462.1 → XP_038364390.1  GDNF family receptor alpha-4 isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

    Range
    17811187..17816066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038635979.1 → XP_038491907.1  GDNF family receptor alpha-4 isoform X2

RNA

  1. XR_005411553.1 RNA Sequence

  2. XR_005411554.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

    Range
    18138277..18143160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038571733.1 → XP_038427661.1  GDNF family receptor alpha-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JP04
    Conserved Domains (1) summary
    pfam02351
    Location:218 → 259
    GDNF; GDNF/GAS1 domain

  2. XM_038571732.1 → XP_038427660.1  GDNF family receptor alpha-4 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JP04, A0A8C0RS90, A0A8I3S0X9
    Conserved Domains (2) summary
    smart00907
    Location:31 → 110
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:122 → 216
    GDNF; GDNF/GAS1 domain

RNA

  1. XR_005377653.1 RNA Sequence

  2. XR_005377654.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    17515732..17520613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022408944.2 → XP_022264652.1  GDNF family receptor alpha-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JP04
    Conserved Domains (1) summary
    pfam02351
    Location:218 → 259
    GDNF; GDNF/GAS1 domain

  2. XM_022408943.2 → XP_022264651.1  GDNF family receptor alpha-4 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JP04, A0A8P0N8S5
    Conserved Domains (1) summary
    pfam02351
    Location:122 → 216
    GDNF; GDNF/GAS1 domain

RNA

  1. XR_002618499.2 RNA Sequence

  2. XR_005314115.1 RNA Sequence

Nucleotide Protein
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