CAPRIN1 cell cycle associated protein 1 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: CAPRIN1provided by VGNC
Official Full Name: cell cycle associated protein 1provided by VGNC
Primary source: VGNC:VGNC:51857
See related: Ensembl:ENSCAFG00845024554
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	18	NC_051822.1 (34306683..34344820, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	18	NC_006600.4 (33301246..33339556, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	18	NC_049239.1 (34093795..34132098, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	18	NC_049278.1 (33865625..33903949, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	18	NC_049759.1 (33458234..33496560, complement)

Chromosome 18 - NC_051822.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH142945 (e-PCR)
- UniSTS:232192

RH79878 (e-PCR)
- UniSTS:86560

RH27392 (e-PCR)
- UniSTS:91644

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: caprin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001313867.2 → NP_001300796.2 caprin-1

Status: PROVISIONAL

Source sequence(s)

JAAUVH010000176

UniProtKB/TrEMBL

A0A8C0PAQ3, A0A8C0T1B5, A0A8I3S8S8

Related

ENSCAFP00845034080.1, ENSCAFT00845043500.1

Conserved Domains (3) summary

COG0419
Location:60 → 206

SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]

pfam12287
Location:367 → 689

Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term

pfam18293
Location:140 → 255

Caprin-1_dimer; Caprin-1 dimerization domain