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MYO1A myosin IA [ Canis lupus familiaris (dog) ]

Gene ID: 607315, updated on 17-Aug-2024

Summary

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Official Symbol
MYO1Aprovided by VGNC
Official Full Name
myosin IAprovided by VGNC
Primary source
VGNC:VGNC:43560
See related
Ensembl:ENSCAFG00845009491
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See MYO1A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
31
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (1181957..1204886, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (1235354..1257456, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (1525383..1547488, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (1158694..1180793, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (1400632..1422725, complement)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 39 Neighboring gene tachykinin precursor 3 Neighboring gene nuclear envelope integral membrane protein 1 Neighboring gene NGFI-A binding protein 2 Neighboring gene signal transducer and activator of transcription 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of sound IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in brush border IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
unconventional myosin-Ia

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001375582.2 → NP_001362511.2  unconventional myosin-Ia

    Status: VALIDATED

    Source sequence(s)
    JAAUVH010000358
    UniProtKB/TrEMBL
    A0A8C0MXX2, A0A8I3N7Z8, A0A8P0S647
    Related
    ENSCAFP00845013030.1, ENSCAFT00845016754.1
    Conserved Domains (3) summary
    smart00015
    Location:741 → 763
    IQ; Calmodulin-binding motif
    cd01378
    Location:22 → 680
    MYSc_Myo1; class I myosin, motor domain
    pfam06017
    Location:846 → 1041
    Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    1181957..1204886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038678798.1 → XP_038534726.1  unconventional myosin-Ia isoform X1

    UniProtKB/TrEMBL
    A0A8C0MXX2, A0A8I3N7Z8, A0A8P0S647
    Conserved Domains (3) summary
    smart00015
    Location:741 → 763
    IQ; Calmodulin-binding motif
    cd01378
    Location:22 → 680
    MYSc_Myo1; class I myosin, motor domain
    pfam06017
    Location:846 → 1041
    Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

  2. XM_038678797.1 → XP_038534725.1  unconventional myosin-Ia isoform X1

    UniProtKB/TrEMBL
    A0A8C0MXX2, A0A8I3N7Z8, A0A8P0S647
    Conserved Domains (3) summary
    smart00015
    Location:741 → 763
    IQ; Calmodulin-binding motif
    cd01378
    Location:22 → 680
    MYSc_Myo1; class I myosin, motor domain
    pfam06017
    Location:846 → 1041
    Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

  3. XM_038678799.1 → XP_038534727.1  unconventional myosin-Ia isoform X1

    UniProtKB/TrEMBL
    A0A8C0MXX2, A0A8I3N7Z8, A0A8P0S647
    Conserved Domains (3) summary
    smart00015
    Location:741 → 763
    IQ; Calmodulin-binding motif
    cd01378
    Location:22 → 680
    MYSc_Myo1; class I myosin, motor domain
    pfam06017
    Location:846 → 1041
    Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

  4. XM_038678800.1 → XP_038534728.1  unconventional myosin-Ia isoform X1

    UniProtKB/TrEMBL
    A0A8C0MXX2, A0A8I3N7Z8, A0A8P0S647
    Conserved Domains (3) summary
    smart00015
    Location:741 → 763
    IQ; Calmodulin-binding motif
    cd01378
    Location:22 → 680
    MYSc_Myo1; class I myosin, motor domain
    pfam06017
    Location:846 → 1041
    Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    1158694..1180793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    1400632..1422725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    1525383..1547488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    1235354..1257456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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