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LACBIDRAFT_244279 actin-related protein Arp2 [ Laccaria bicolor S238N-H82 ]

Gene ID: 6070621, updated on 28-Dec-2023

Summary

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Gene symbol
LACBIDRAFT_244279
Gene description
actin-related protein Arp2
Locus tag
LACBIDRAFT_244279
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Laccaria bicolor S238N-H82 (strain: S238N-H82)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria
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Genomic context

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See LACBIDRAFT_244279 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
8

NW_001889873.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001889873.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Martin F, et al. Nature, 2008 Mar 6. PMID 18322534
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Arp2/3 protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cortical patch IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-related protein Arp2
XP_001874453.1
  • duplication of e_gwh1.2.388.1 at Lacbi1/scaffold_2:430556-432125

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001889873.1 Reference assembly

    Range
    382081..383745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001874418.1 → XP_001874453.1  actin-related protein Arp2 [Laccaria bicolor S238N-H82]

    See identical proteins and their annotated locations for XP_001874453.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0CTC7
    Conserved Domains (2) summary
    smart00268
    Location:7 → 377
    ACTIN; Actin
    cl17037
    Location:8 → 377
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials